Publications

336. Phenolic Profiling of Caffeic Acid O-Methyltransferase-Deficient Poplar Reveals Novel Benzodioxane Oligolignols

Kris Morreel, John Ralph, Fachuang Lu, Geert Goeminne, Roger Busson, Piet Herdewijn, Jan L. Goeman, Johan Van der Eycken, Wout Boerjan, Eric Messens

(2004/12) - Plant Physiology

DOI
335. Heterodimerization and endocytosis of Arabidopsis brassinosteroid receptors BRI1 and AtSERK3 (BAK1).

Russinova E, Borst JW, Kwaaitaal M, Caño-Delgado A, Yin Y, Chory J, de Vries SC

(2004/12) -

DOI
334. A technology platform for the fast production of monoclonal recombinant antibodies against plant proteins and peptides.

Eeckhout D, De Clercq A, Van De Slijke E, Van Leene J, Stals H, Casteels P, Persiau G, Vercammen D, Van Breusegem F, Zabeau M, Inzé D, Jespers L, Depicker A, De Jaeger G

(2004/11) -

DOI
333. A technology platform for the fast production of monoclonal recombinant antibodies against plant proteins and peptides.

Eeckhout D, De Clercq A, Van De Slijke E, Van Leene J, Stals H, Casteels P, Persiau G, Vercammen D, Van Breusegem F, Zabeau M, Inzé D, Jespers L, Depicker A, De Jaeger G

(2004/11) -

DOI
332. Profiling of Oligolignols Reveals Monolignol Coupling Conditions in Lignifying Poplar Xylem

Kris Morreel, John Ralph, Hoon Kim, Fachuang Lu, Geert Goeminne, Sally Ralph, Eric Messens, Wout Boerjan

(2004/11) - Plant Physiology

DOI
331. Rhizobium infection: lessons from the versatile nodulation behaviour of water-tolerant legumes.

Goormachtig S, Capoen W, Holsters M

(2004/11) -

DOI
330. Molecular dissection of plant cytokinesis and phragmoplast structure: a survey of GFP-tagged proteins.

Van Damme D, Bouget FY, Van Poucke K, Inzé D, Geelen D

(2004/11) - The Plant journal : for cell and molecular biology

DOI
329. In vivo dynamics and differential microtubule-binding activities of MAP65 proteins.

Van Damme D, Van Poucke K, Boutant E, Ritzenthaler C, Inzé D, Geelen D

(2004/11) - Plant physiology

DOI
328. Type II metacaspases Atmc4 and Atmc9 of Arabidopsis thaliana cleave substrates after arginine and lysine.

Vercammen D, van de Cotte B, De Jaeger G, Eeckhout D, Casteels P, Vandepoele K, Vandenberghe I, Van Beeumen J, Inzé D, Van Breusegem F

(2004/10) -

DOI
327. Computational approaches to unveiling ancient genome duplications

Yves Van de Peer

(2004/10) - Nature Reviews Genetics

DOI
326. The plant-specific cyclin-dependent kinase CDKB1;1 and transcription factor E2Fa-DPa control the balance of mitotically dividing and endoreduplicating cells in Arabidopsis.

Boudolf V, Vlieghe K, Beemster GT, Magyar Z, Torres Acosta JA, Maes S, Van Der Schueren E, Inzé D, De Veylder L

(2004/10) -

DOI
325. Type II metacaspases Atmc4 and Atmc9 of Arabidopsis thaliana cleave substrates after arginine and lysine.

Vercammen D, van de Cotte B, De Jaeger G, Eeckhout D, Casteels P, Vandepoele K, Vandenberghe I, Van Beeumen J, Inzé D, Van Breusegem F

(2004/10) -

DOI
324. Reactive oxygen gene network of plants.

Mittler R, Vanderauwera S, Gollery M, Van Breusegem F

(2004/10) -

DOI
323. Molecular Phenotyping of the pal1 and pal2 Mutants of Arabidopsis thaliana Reveals Far-Reaching Consequences on Phenylpropanoid, Amino Acid, and Carbohydrate Metabolism

Antje Rohde, Kris Morreel, John Ralph, Geert Goeminne, Vanessa Hostyn, Riet De Rycke, Sergej Kushnir, Jan Van Doorsselaere, Jean-Paul Joseleau, Marnik Vuylsteke, Gonzalez Van Driessche, Jozef Van Beeumen, Eric Messens, Wout Boerjan

(2004/10) - The Plant Cell

DOI
322. Genetic and physical mapping of Melampsora rust resistance genes in Populus and characterization of linkage disequilibrium and flanking genomic sequence

T.‐M. Yin, S. P. DiFazio, L. E. Gunter, S. S. Jawdy, W. Boerjan, G. A. Tuskan

(2004/10) - New Phytologist

DOI
321. A small CDC25 dual-specificity tyrosine-phosphatase isoform in Arabidopsis thaliana.

Landrieu I, da Costa M, De Veylder L, Dewitte F, Vandepoele K, Hassan S, Wieruszeski JM, Corellou F, Faure JD, Van Montagu M, Inzé D, Lippens G

(2004/09) -

DOI
320. Characterization of the Arabidopsis thaliana Arath;CDC25 dual-specificity tyrosine phosphatase.

Landrieu I, Hassan S, Sauty M, Dewitte F, Wieruszeski JM, Inzé D, De Veylder L, Lippens G

(2004/09) -

DOI
319. Gene flow between cultivated poplars and native black poplar (Populus nigra L.): a case study along the river Meuse on the Dutch–Belgian border

A Vanden Broeck, V Storme, J.E Cottrell, W Boerjan, E Van Bockstaele, P Quataert, J Van Slycken

(2004/08) - Forest Ecology and Management

DOI
318. Disclosing the subterranean treasury of plants.

Beeckman T

(2004/08) - Trends in Biotechnology

DOI
317. Belo Horizonte virus: a vaccinia-like virus lacking the A-type inclusion body gene isolated from infected mice

Giliane S. Trindade, Flávio G. da Fonseca, João T. Marques, Sueli Diniz, Juliana A. Leite, Stefanie De Bodt, Yves Van der Peer, Cláudio A. Bonjardim, Paulo C. P. Ferreira, Erna G. Kroon

(2004/07) - Journal of General Virology

DOI
316. A plant-specific subclass of C-terminal kinesins contains a conserved a-type cyclin-dependent kinase site implicated in folding and dimerization.

Vanstraelen M, Torres Acosta JA, De Veylder L, Inzé D, Geelen D

(2004/07) -

DOI
315. Catalase deficiency drastically affects gene expression induced by high light in Arabidopsis thaliana.

Vandenabeele S, Vanderauwera S, Vuylsteke M, Rombauts S, Langebartels C, Seidlitz HK, Zabeau M, Van Montagu M, Inzé D, Van Breusegem F

(2004/07) -

DOI
314. Molecular characterization of Arabidopsis PHO80 like proteins, a novel class of CDKA;1 interacting cyclins

Torres Acosta JA, de Almeida Engler J, Raes J, Magyar Z, De Groodt R, Inzé D, De Veylder L

(2004/06) - Cellular and Molecular Life Sciences

DOI
313. Annotation of a 95-kb Populus deltoides genomic sequence reveals a disease resistance gene cluster and novel class I and class II transposable elements

M. Lescot, S. Rombauts, J. Zhang, S. Aubourg, C. Mathé, S. Jansson, P. Rouzé, W. Boerjan

(2004/06) - Theoretical and Applied Genetics

DOI
312. Analysis of the spatial expression pattern of seven Kip related proteins (KRPs) in the shoot apex of Arabidopsis thaliana.

Ormenese S, de Almeida Engler J, De Groodt R, De Veylder L, Inzé D, Jacqmard A

(2004/05) -

DOI
311. B1-type cyclin-dependent kinases are essential for the formation of stomatal complexes in Arabidopsis thaliana.

Boudolf V, Barrôco R, Engler Jde A, Verkest A, Beeckman T, Naudts M, Inzé D, De Veylder L

(2004/04) -

DOI
310. Ex-situ conservation of Black poplar in Europe: genetic diversity in nine gene bank collections and their value for nature development

V. Storme, A. Vanden Broeck, B. Ivens, D. Halfmaerten, J. Van Slycken, S. Castiglione, F. Grassi, T. Fossati, J. E. Cottrell, H. E. Tabbener, F. Lefèvre, C. Saintagne, S. Fluch, V. Krystufek, K. Burg, S. Bordács, A. Borovics, K. Gebhardt, B. Vornam, A. Pohl, N. Alba, D. Agúndez, C. Maestro, E. Notivol, J. Bovenschen, B. C. van Dam, J. van der Schoot, B. Vosman, W. Boerjan, M. J. M. Smulders

(2004/04) - Theoretical and Applied Genetics

DOI
309. Switch from intracellular to intercellular invasion during water stress-tolerant legume nodulation.

Goormachtig S, Capoen W, James EK, Holsters M

(2004/04) -

DOI
308. Phenotypic alterations in Arabidopsis thaliana plants caused by Rhodococcus fascians infection

Carmem-Lara de O. Manes, Tom Beeckman, Tita Ritsema, Marc Van Montagu, Koen Goethals, Marcelle Holsters

(2004/04) - Journal of Plant Research

DOI
307. Conditional, recombinase-mediated expression of genes in plant cell cultures.

Joubès J, De Schutter K, Verkest A, Inzé D, De Veylder L

(2004/03) -

DOI
306. Conservation of RNA structures enables TNV and BYDV 5' and 3' elements to cooperate synergistically in cap-independent translation.

Meulewaeter F, van Lipzig R, Gultyaev AP, Pleij CW, Van Damme D, Cornelissen M, van Eldik G

(2004/03) - Nucleic acids research

DOI
305. B1-type cyclin-dependent kinases are essential for the formation of stomatal complexes in Arabidopsis thaliana.

Boudolf V, Barrôco R, Engler Jde A, Verkest A, Beeckman T, Naudts M, Inzé D, De Veylder L

(2004/03) - The Plant Cell

DOI
304. Transcript profiling of early lateral root initiation.

Himanen K, Vuylsteke M, Vanneste S, Vercruysse S, Boucheron E, Alard P, Chriqui D, Van Montagu M, Inzé D, Beeckman T

(2004/03) - Proceedings of the National Academy of Sciences of the United States of America

DOI
303. Lignins: Natural polymers from oxidative coupling of 4-hydroxyphenyl- propanoids

John Ralph, Knut Lundquist, Gösta Brunow, Fachuang Lu, Hoon Kim, Paul F. Schatz, Jane M. Marita, Ronald D. Hatfield, Sally A. Ralph, Jørgen Holst Christensen, Wout Boerjan

(2004/01) - Phytochemistry Reviews

DOI
302. Nodule-enhanced protease inhibitor gene: emerging patterns of gene expression in nodule development on Sesbania rostrata.

Lievens S, Goormachtig S, Holsters M

(2004/01) -

DOI
301. An easy and versatile embedding method for transverse sections.

De Smet I, Chaerle P, Vanneste S, De Rycke R, Inzé D, Beeckman T

(2004/01) - Journal of Microscopy

DOI
300. Tetraodon genome confirms Takifugu findings: most fish are ancient polyploids

Yves Van de Peer

(2004) - Genome Biology

DOI
299. Feature selection for splice site prediction: A new method using EDA-based feature ranking

Saeys, Y., Degroeve, S., Aeyels, D., Rouzé, P., Van de Peer, Y.

(2004) - BMC Bioinformatics

DOI
298. The first green lineage cdc25 dual-specificity phosphatase

Khadaroo, B., Robbens, S., Ferraz, C., Derelle, E., Eychenié, S., Cooke, R., Peaucellier, G., Delseny, M., Demaille, J., Van De Peer, Y., Picard, A., Moreau, H.

(2004) - Cell Cycle

DOI
297. The European ribosomal RNA database

WUYTS, J, PERRIERE, G, VAN DE PEER, Y

(2004) - NUCLEIC ACIDS RESEARCH

DOI
296. The 18S rRNA from Odontophrynus americanus 2n and 4n (Amphibia, Anura) reveals unusual extra sequences in the variable region V2

ALVARES, LE, WUYTS, J, VAN DE PEER, Y, SILVA, EP, COUTINHO, LL, BRISON, O, RUIZ, IRG

(2004) - GENOME

DOI
295. Recent developments in computational approaches for uncovering genomic homology

SIMILLION, C, VANDEPOELE, K, VAN DE PEER, Y

(2004) - BIOESSAYS

DOI
294. Feature selection for splice site prediction: A new method using EDA-based feature ranking

SAEYS, Y, DEGROEVE, S, AEYELS, D, ROUZE, P, VAN DE PEER, Y

(2004) - BMC BIOINFORMATICS

No link available
293. Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences

BONNET, E, WUYTS, J, ROUZE, P, VAN DE PEER, Y

(2004) - BIOINFORMATICS

DOI
292. Gene duplication and biased functional retention of paralogs in bacterial genomes

GEVERS, D, VANDEPOELE, K, SIMILLION, C, VAN DE PEER, Y

(2004) - TRENDS IN MICROBIOLOGY

DOI
291. Digging into Acceptor Splice Site Prediction: An Iterative Feature Selection Approach

Yvan Saeys, Sven Degroeve, Yves Van de Peer

(2004) - Lecture Notes in Computer Science

DOI
290. Building genomic profiles for uncovering segmental homology in the twilight zone

SIMILLION, C, VANDEPOELE, K, SAEYS, Y, VAN DE PEER, Y

(2004) - GENOME RESEARCH

DOI
289. Major events in the genome evolution of vertebrates: Paranome age and size differ considerably between ray-finned fishes and land vertebrates

VANDEPOELE, K, DE VOS, W, TAYLOR, JS, MEYER, A, VAN DE PEER, Y

(2004) - PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DOI
288. Detection of 91 potential in plant conserved plant microRNAs in Arabidopsis thaliana and Oryza sativa identifies important target genes

BONNET, E, WUYTS, J, ROUZE, P, VAN DE PEER, Y

(2004) - PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DOI
287. 'Horizontal' plant biology on the rise

Yves Van de Peer

(2004) - Genome Biology

DOI
286. Splice site prediction in eukaryote genome sequences: the algorithmic issues

Degroeve S., Saeys Y., De Baets B., Van de Peer Y., Rouzé P.

(2004) - The New Avenues in Bioinformatics

No link available
285. The quest for genomic homology

Vandepoele, K., Simillion, C., Van de Peer, Y.

(2004) - Current Genomics

DOI
284. Preparation and relevance of a cross-coupling product between sinapyl alcohol and sinapyl p-hydroxybenzoate

Fachuang Lu, John Ralph, Kris Morreel, Eric Messens, Wout Boerjan

(2004) - Organic & Biomolecular Chemistry

DOI
283. An easy and versatile embedding method for transverse sections

De Smet, I, Chaerle, P, Vanneste, S, Rycke, RD, Inze, D, Beeckman, T

(2004) - Journal of Microscopy-Oxford

DOI